Job

Overview

Created by jacobo on 11/09/14.

Summary

Data Model

Job

You can find the Java code here.

Field	Description
id String	Job ID is a mandatory parameter when creating a new sample, this ID cannot be changed at the moment.Tags: required, immutable, unique
uuid String	Global unique ID at the whole OpenCGA installation. This is automatically created during the sample creation and cannot be changed.Tags: internal, unique, immutable
description String	An string to describe the properties of the Job.
tool ToolInfo
userId String
commandLine String
params Map<Object,String>
creationDate String	String representing when the sample was created, this is automatically set by OpenCGA.Tags: internal
modificationDate String	String representing when was the last time the sample was modified, this is automatically set by OpenCGA.Tags: internal
priority Priority
internal JobInternal	An object describing the internal information of the Sample. This is managed by OpenCGA.Tags: internal
outDir File
input List<File>
output List<File>
tags List<String>
dependsOn List<Job>
execution ExecutionResult
stdout File
stderr File
visited boolean
OPENCGA_PARENTS String
release int	An integer describing the current data release.Tags: internal
study JobStudyParam
attributes Map<Object,String>

JobStudyParam

You can find the Java code here.

Field	Description
id String
others List<String>

File

You can find the Java code here.

ExecutionResult

You can find the Java code here.

Enum Enums.Priority

Enumeration class. You can find the Java code here.

ToolInfo

You can find the Java code here.

SampleInternal

You can find the Java code here.

FileInternal

You can find the Java code here.

JobInternal

You can find the Java code here.

ProjectInternal

You can find the Java code here.

CohortInternal

You can find the Java code here.

StudyInternal

You can find the Java code here.